October 2020 **************** It's been a LONG time.... TODO and upcoming 10/27/2020 ************** -remote access tmblab via VNCVIEWER of TMBlab computers check: everyone can connect to rna,dna,gua,tmb4,tmb5 w/ ssh directions here: SHELL NUMBER 1: ce1 117% ssh -L 5901:localhost:5901 ade Last login: Mon Oct 26 14:34:53 2020 from localhost Have a lot of fun... ade 105% SHELL NUMBER 2: ce1 107% vncviewer localhost::5901 and then follow prompts to login dcr025:MAC has done this: ade, gua ,tmb4, and tmb5 does even better and tunnels thru dna to tmb4,5 others all thru 5901 showed that vnc does not have access to DNA rsu007:MAC tmb4-> ade,gua and laptop->ade,tmb4(no),tmb5(no) no-> could not sync environment to dbus .. jli007:Windows: home-> ade,gua, tmb4 cannot connect DNA ade gave a blackscreen works w/out any tunnel and presumably is iencyrpted via the VPN connection but again w/out any cuda (at least on TMB4) -review of /autotmb/home/tmbshare/Projects/NuModeller/examples/MonoNuc/ see the email to bishoplab-list on 10/25 worked for jli007 when he tried to wrun the scriptr but only showed pre-computed stuff rather than running in real time. -numodeller on GitHub -add file on TODO with some timelines https://github.com/tcbishop/NuModeller see the TODO. -scripts for PCA analysis of helical parameters obtained from a simulation extraction of helix parm from DCD -Ran and Bishop discuss thesis -